Accession
MI0003726
Description
Epstein Barr virus
ebv-mir-BART4 precursor miRNA
Sequence
uuugguggGACCUGAUGCUGCUGGUGUGCUguaaauaagugccuagCACAUCACGUAGGCACCAGGUGUcaccagg
.(((((((.(((((.((((((((((((((((((......)))..))))))))).))).))).))))).))))))).
.(((((((.(((((.((((((((((((((((((......)))..))))))))).))).))).))))).))))))).
Structure
u G A - - -- aa uuggugg ACCUG UGC UGC UGGUGUGCU gua u ||||||| ||||| ||| ||| ||||||||| ||| gaccacU UGGAC ACG AUG ACUACACga cgu a g G C G C uc ga
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
mir-BART4 was discovered independently by two groups. Cai et al. mapped the ends of the mature sequence by cloning [1]. Grundhoff et al confirmed that the 5' arm gives rise to a mature miRNA product, but didnot experimentally determine the extents of that product [2].
Genome context
HHV507799: 139220-139295 [+]
Clustered miRNAs
20 other miRNAs are < 10 kb from ebv-mir-BART4
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Disease association
ebv-mir-BART4 is associated with one or more human diseases in the Human microRNA Disease Database
| Disease | Description | Category | PubMed ID |
|---|
Database links
Mature ebv-miR-BART4-5p
| Accession | MIMAT0003412 |
| Description | Epstein Barr virus ebv-miR-BART4-5p mature miRNA |
| Sequence | 9 - GACCUGAUGCUGCUGGUGUGCU - 30 |
| Evidence |
experimental
cloned [1,3], array [2], Northern [2] |
Mature ebv-miR-BART4-3p
| Accession | MIMAT0009204 |
| Description | Epstein Barr virus ebv-miR-BART4-3p mature miRNA |
| Sequence | 47 - CACAUCACGUAGGCACCAGGUGU - 69 |
| Evidence |
experimental
454 [4] |
References
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