Stem-loop gga-mir-365-2

Accession

MI0003704

Description

Gallus gallus gga-mir-365-2 precursor miRNA

Gene family

MIPF0000061; mir-365

Literature search

4 open access papers mention gga-mir-365-2
(20 sentences)

Sequence

782 reads, 11 reads per million, 5 experiments

ggcagcaagaaaaauGAGGGACUUUCAGGGGCAGCUGUguuuuacuaacccagucaUAAUGCCCCUAAAAAUCCUUAUuguucuugcaauggucaa
(((.(((((((.((((((((..(((.(((((((((((.(((.....))).)))).....))))))).))).)))))))).)))))))....)))..

Structure

--   ---a       a        AC   C       -----    U   u 
  ggc    gcaagaa aauGAGGG  UUU AGGGGCA     GCUG guu u
  |||    ||||||| ||||||||  ||| |||||||     |||| ||| a
  cug    cguucuu uUAUUCCU  AAA UCCCCGU     ugac caa c
aa   guaa       g        -A   A       AAUac    c   u 

Annotation confidence High

Genome context

chr18: 6504853-6504948 [+]

Mature gga-miR-365-3p

• Accession: MIMAT0003361
• Description: Gallus gallus gga-miR-365-3p mature miRNA
• Sequence: 57 - UAAUGCCCCUAAAAAUCCUUAU - 78
• Evidence: experimental ; Illumina [1]

Mature gga-miR-365-2-5p

• Accession: MIMAT0031075
• Description: Gallus gallus gga-miR-365-2-5p mature miRNA
• Sequence: 16 - GAGGGACUUUCAGGGGCAGCUGU - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45