Stem-loop gga-mir-365-1

Accession

MI0003703

Description

Gallus gallus gga-mir-365-1 precursor miRNA

Gene family

MIPF0000061; mir-365

Literature search

4 open access papers mention gga-mir-365-1
(13 sentences)

Sequence

697 reads, 10 reads per million, 5 experiments

cgcagggaaaauGAGGGACUUUUGGGGGCAGAUGUguuuccauuacacuaucaUAAUGCCCCUAAAAAUCCUUAUugcucuugca
.((((((..((((((((..((((((((((((((((((.......)))).)))....))))))))))).))))))))..)))))).

Structure

c      aa        AC           ----   -    uu 
 gcaggg  aauGAGGG  UUUUGGGGGCA    GAU GUgu  c
 ||||||  ||||||||  |||||||||||    ||| ||||  c
 cguucu  uUAUUCCU  AAAAUCCCCGU    cua caca  a
a      cg        -A           AAUa   u    uu 

Annotation confidence High

Genome context

chr14: 769114-769198 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from gga-mir-365-1

Mature gga-miR-365-3p

• Accession: MIMAT0003361
• Description: Gallus gallus gga-miR-365-3p mature miRNA
• Sequence: 54 - UAAUGCCCCUAAAAAUCCUUAU - 75
• Evidence: experimental ; Illumina [1]

Mature gga-miR-365-1-5p

• Accession: MIMAT0026630
• Description: Gallus gallus gga-miR-365-1-5p mature miRNA
• Sequence: 13 - GAGGGACUUUUGGGGGCAGAUGU - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45