Stem-loop tni-mir-96

Accession

MI0003456

Description

Tetraodon nigroviridis tni-mir-96 precursor miRNA

Sequence

uugcccauUUUGGCACUAGCACAUUUUUGCUucuguauauauacuuugagcaauuauguguagugccaauauaggaga
...((.((.(((((((((.(((((..((((((..(((....)))...))))))..)))))))))))))).)).))...

Structure

uug  c  U         G     UU      -cu   u 
   cc au UUGGCACUA CACAU  UUGCUu   gua a
   || || ||||||||| |||||  ||||||   |||  
   gg ua aaccgugau gugua  aacgag   cau u
aga  a  u         -     uu      uuu   a 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

19: 3385386-3385463 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from tni-mir-96

Mature tni-miR-96

• Accession: MIMAT0003092
• Description: Tetraodon nigroviridis tni-miR-96 mature miRNA
• Sequence: 9 - UUUGGCACUAGCACAUUUUUGCU - 31
• Evidence: not_experimental

References