miRBase entry: tni-mir-27c

Stem-loop tni-mir-27c

Accession
MI0003432
Description
Tetraodon nigroviridis tni-mir-27c precursor miRNA
Sequence

ggcugugcggcggcaggacuuaacccacaugugaacagugagugugccgugUUCACAGUGGUUAAGUUCUGCcgcc
........(((((((((((((((((.((.((((((((..(......)..)))))))))))))))))))))))))))
Structure
ggcugugc                 c  a        gu ag 
        ggcggcaggacuuaacc ac ugugaaca  g  u
        ||||||||||||||||| || ||||||||  |   
        ccgcCGUCUUGAAUUGG UG ACACUUgu  c  g
--------                 -  -        gc gu
Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
3: 8970174-8970249 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from tni-mir-27c
Name Accession Chromosome Start End Strand Confidence



Database links

Mature tni-miR-27c

Accession MIMAT0003078
Description Tetraodon nigroviridis tni-miR-27c mature miRNA
Sequence 52 - UUCACAGUGGUUAAGUUCUGC - 72
Evidence not_experimental

References
Comments or questions? Email mirbase@manchester.ac.uk