Stem-loop tni-mir-128-1

Accession

MI0003422

Description

Tetraodon nigroviridis tni-mir-128-1 precursor miRNA

Sequence

77402 reads, 2841.0 reads per million, 3 experiments

gcugcauaCGGGGCCGGGACGCUGUUUGAGAguccacuaugaaucUCACAGUGAACCGGUCUCUUUUgcagc
((((((...((((((((..((((((..((((.((......)).))))))))))..))))))))...))))))

Structure

      uaC        GA      UU    g  ca 
gcugca   GGGGCCGG  CGCUGU  GAGA uc  c
||||||   ||||||||  ||||||  |||| ||   
cgacgU   CUCUGGCC  GUGACA  CUcu ag  u
      UUU        AA      --    a  ua 

Annotation confidence High

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

3: 4160307-4160378 [-]

Mature tni-miR-128-1-5p

• Accession: MIMAT0052958
• Description: Tetraodon nigroviridis tni-miR-128-1-5p mature miRNA
• Sequence: 9 - CGGGGCCGGGACGCUGUUUGAGA - 31
• Evidence: not_experimental

Mature tni-miR-128-3p

• Accession: MIMAT0003019
• Description: Tetraodon nigroviridis tni-miR-128-3p mature miRNA
• Sequence: 46 - UCACAGUGAACCGGUCUCUUUU - 67
• Evidence: not_experimental

References