Stem-loop fru-mir-24-1

Accession

MI0003413

Description

Fugu rubripes fru-mir-24-1 precursor miRNA

Sequence

ggguugugcccuccuGUGCCUACUGAACUGGUAUCAGUgucauacuggaaaacUGGCUCAGUUCAGCAGGAACAGgagu
((((...))))((((((.(((.(((((((((..(((((.((......))..))))).))))))))).))).))))))..

Structure

ggguugugccc      G   A         UA     -g  au 
           uccuGU CCU CUGAACUGG  UCAGU  uc  a
           |||||| ||| |||||||||  |||||  ||   
           agGACA GGA GACUUGACU  GGUca  ag  c
---------ug      A   C         -C     aa  gu 

Annotation confidence Low

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602554.1: 7365203-7365281 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from fru-mir-24-1

Mature fru-miR-24-5p

• Accession: MIMAT0003384
• Description: Fugu rubripes fru-miR-24-5p mature miRNA
• Sequence: 16 - GUGCCUACUGAACUGGUAUCAGU - 38
• Evidence: not_experimental

Mature fru-miR-24-3p

• Accession: MIMAT0003065
• Description: Fugu rubripes fru-miR-24-3p mature miRNA
• Sequence: 54 - UGGCUCAGUUCAGCAGGAACAG - 75
• Evidence: not_experimental

References