Stem-loop fru-mir-26

Accession

MI0003369

Description

Fugu rubripes fru-mir-26 precursor miRNA

Sequence

3160075 reads, 36629.0 reads per million, 12 experiments

aggccucggccuggUUCAAGUAAUCCAGGAUAGGCUgguuaacccugcacggCCUAUUCUUGAUUACUUGUGUCAGgaaguggccgug
.((((.(..(((((..(((((((((.(((((((((((((.......)).))))))))))).)))))))))..)))))..).))))...

Structure

--a    u gg     UU         C           -  ua 
   ggcc c  ccugg  CAAGUAAUC AGGAUAGGCUg gu  a
   |||| |  |||||  ||||||||| ||||||||||| ||  c
   ccgg g  gGACU  GUUCAUUAG UCUUAUCCggc cg  c
gug    u aa     GU         U           a  uc 

Annotation confidence High

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

ref|NC_042287.1|: 1098827-1098914 [+]

Mature fru-miR-26-5p

• Accession: MIMAT0003037
• Description: Fugu rubripes fru-miR-26-5p mature miRNA
• Sequence: 15 - UUCAAGUAAUCCAGGAUAGGCU - 36
• Evidence: not_experimental

Mature fru-miR-26-3p

• Accession: MIMAT0052888
• Description: Fugu rubripes fru-miR-26-3p mature miRNA
• Sequence: 53 - CCUAUUCUUGAUUACUUGUGUCAG - 76
• Evidence: not_experimental

References