Accession
MI0003303
Description
Fugu rubripes
fru-mir-200a precursor miRNA
Sequence
ucucaggauccaucuuacccgacagugcuggauuguacuacuguuguucUAACACUGUCUGGUAACGAUGUuuucugggugac
.(((((((..(((((((((.(((((((.((((....((....))...)))).))))))).))))).))))..)))))))....
.(((((((..(((((((((.(((((((.((((....((....))...)))).))))))).))))).))))..)))))))....
Structure
---u uc - c c uugu u
cucagga cauc uuacc gacagug ugga ac a
||||||| |||| ||||| ||||||| |||| ||
gggucuu GUAG AAUGG CUGUCAC AUcu ug c
cagu uU C U A -ugu u
Annotation confidence
Low
Do you think this miRNA is real?
Comments
This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
HE602537.1: 1332406-1332488 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from fru-mir-200a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature fru-miR-200a
| Accession | MIMAT0002981 |
| Description | Fugu rubripes fru-miR-200a mature miRNA |
| Sequence | 50 - UAACACUGUCUGGUAACGAUGU - 71 |
| Evidence | not_experimental |
References
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