Stem-loop tni-mir-217

Accession

MI0003290

Description

Tetraodon nigroviridis tni-mir-217 precursor miRNA

Sequence

ucuugauguggaugaUACUGCAUCAGGAACUGAUUGGcugaugcuuaguacccaacaguaccugaugcauugccuucagcauugaaaga
..(((((((.((.(.((.(((((((((.((((.((((((((...))))...)))))))).))))))))).)).).)).)))))))....

Structure

--uc       g  u a  C         A    A    ---    u 
    uugaugu ga g UA UGCAUCAGG ACUG UUGG   cuga  
    ||||||| || | || ||||||||| |||| ||||   |||| g
    aguuacg cu c gu acguagucc ugac aacc   gauu  
agaa       a  u c  u         a    -    cau    c 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

17: 5748304-5748392 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from tni-mir-217

Mature tni-miR-217

• Accession: MIMAT0002972
• Description: Tetraodon nigroviridis tni-miR-217 mature miRNA
• Sequence: 16 - UACUGCAUCAGGAACUGAUUGG - 37
• Evidence: not_experimental

References