Accession
MI0003290
Description
Tetraodon nigroviridis
tni-mir-217 precursor miRNA
Sequence
ucuugauguggaugaUACUGCAUCAGGAACUGAUUGGcugaugcuuaguacccaacaguaccugaugcauugccuucagcauugaaaga
..(((((((.((.(.((.(((((((((.((((.((((((((...))))...)))))))).))))))))).)).).)).)))))))....
..(((((((.((.(.((.(((((((((.((((.((((((((...))))...)))))))).))))))))).)).).)).)))))))....
Structure
--uc g u a C A A --- u
uugaugu ga g UA UGCAUCAGG ACUG UUGG cuga
||||||| || | || ||||||||| |||| |||| |||| g
aguuacg cu c gu acguagucc ugac aacc gauu
agaa a u c u a - cau c
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
17: 5748304-5748392 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from tni-mir-217
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature tni-miR-217
| Accession | MIMAT0002972 |
| Description | Tetraodon nigroviridis tni-miR-217 mature miRNA |
| Sequence | 16 - UACUGCAUCAGGAACUGAUUGG - 37 |
| Evidence | not_experimental |
References
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