Stem-loop tni-mir-9-1

Accession

MI0003226

Description

Tetraodon nigroviridis tni-mir-9-1 precursor miRNA

Sequence

cagagggguugucuguuaUCUUUGGUUAUCUAGCUGUAUGAgugacguacaaucuucauaaagcuagauaaccgaaaguaacaagaaucccauua
....((((((.(.((((((.(((((((((((((((.((((((.((.......)))))))).))))))))))))))).))))))).))))))....

Structure

caga      g c      C               G      u  cg 
    gggguu u uguuaU UUUGGUUAUCUAGCU UAUGAg ga  u
    |||||| | |||||| ||||||||||||||| |||||| ||  a
    cccuaa a acaaug aagccaauagaucga auacuu cu  c
auua      g -      a               a      -  aa 

Annotation confidence Low

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

21_random: 1842676-1842770 [+]

Mature tni-miR-9

• Accession: MIMAT0002911
• Description: Tetraodon nigroviridis tni-miR-9 mature miRNA
• Sequence: 19 - UCUUUGGUUAUCUAGCUGUAUGA - 41
• Evidence: not_experimental

References