miRBase entry: mml-mir-25

Stem-loop mml-mir-25

Accession

MI0003075

Description

Macaca mulatta mml-mir-25 precursor miRNA

Literature search

7 open access papers mention mml-mir-25
(39 sentences)

Sequence

2771164 reads, 3747.0 reads per million, 153 experiments

ggccaguguugagAGGCGGAGACUUGGGCAAUUGCUggacgcugcccugggCAUUGCACUUGUCUCGGUCUGAcagugccggcc
((((.((((((..((((.(((((..(.(((((..((((........))))..))))).)..))))).))))..)))))).))))

Structure

    a      ag    G     UU G     UG    acg 
ggcc guguug  AGGC GAGAC  G GCAAU  CUgg   c
|||| ||||||  |||| |||||  | |||||  ||||    
ccgg cgugac  UCUG CUCUG  C CGUUA  gguc   u
    c      AG    G     UU A     Cg    ccg

Annotation confidence High

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Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

3: 42275973-42276056 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from mml-mir-25

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mml-miR-25-5p

Accession	MIMAT0061164
Description	Macaca mulatta mml-miR-25-5p mature miRNA
Sequence	14 - AGGCGGAGACUUGGGCAAUUGCU - 36
Evidence	not_experimental

Mature mml-miR-25-3p

Accession	MIMAT0002774
Description	Macaca mulatta mml-miR-25-3p mature miRNA
Sequence	52 - CAUUGCACUUGUCUCGGUCUGA - 73
Evidence	not_experimental
Database links
Predicted targets

References

PubMed ID: 15652478
Phylogenetic shadowing and computational identification of human microRNA genes
"Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
"Cell (2005) 120:21-24