Accession
MI0003059
Description
Gorilla gorilla
ggo-mir-106b precursor miRNA
Sequence
1690
reads,
117.0
reads per million, 4 experiments
ccugccggggcUAAAGUGCUGACAGUGCAGAUAgugguccucuccgugcuaCCGCACUGUGGGUACUUGCUGcuccagcagg
(((((.(((((..(((((((.(((((((.(.((((((......))..))))).))))))).)))))))...))))).)))))
(((((.(((((..(((((((.(((((((.(.((((((......))..))))).))))))).)))))))...))))).)))))
Structure
c -UA G A A -- uc
ccugc ggggc AAGUGCU ACAGUGC G UAgu gg c
||||| ||||| ||||||| ||||||| | |||| ||
ggacg ccucG UUCAUGG UGUCACG C aucg cc u
a UCG G C - ug uc
Annotation confidence
High
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.
Genome context
chr7: 77984054-77984135 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from ggo-mir-106b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ggo-miR-106b-5p
| Accession | MIMAT0002758 |
| Description | Gorilla gorilla ggo-miR-106b-5p mature miRNA |
| Sequence | 12 - UAAAGUGCUGACAGUGCAGAUA - 33 |
| Evidence | not_experimental |
Mature ggo-miR-106b-3p
| Accession | MIMAT0061273 |
| Description | Gorilla gorilla ggo-miR-106b-3p mature miRNA |
| Sequence | 52 - CCGCACUGUGGGUACUUGCUG - 72 |
| Evidence | experimental |
References
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