Stem-loop sla-mir-23a

Accession

MI0003054

Description

Saguinus labiatus sla-mir-23a precursor miRNA

Sequence

ggccggcugggguuccuggggaugggauuugcugccuaucacaaAUCACAUUGCCAGGGAUUUCCaaccgacc
((.(((.((((((((((((.((((.((((((.((.....)))))))).)))).))))))).))))).))).))

Structure

  c   c     -       g    g      c  c 
gg cgg ugggg uuccugg gaug gauuug ug c
|| ||| ||||| ||||||| |||| |||||| || u
cc gcc aCCUU AGGGACC UUAC CUAaac ac a
  a   a     U       G    A      -  u 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature sla-miR-23a

• Accession: MIMAT0002754
• Description: Saguinus labiatus sla-miR-23a mature miRNA
• Sequence: 45 - AUCACAUUGCCAGGGAUUUCC - 65
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24