Stem-loop lca-mir-27a

Accession

MI0003044

Description

Lemur catta lca-mir-27a precursor miRNA

Sequence

cugaggagcagggcuuagcugcuugugagcaggguccacaccaaaucaugUUCACAGUGGCUAAGUUCCGCCccccgg
(((.((.((.(((((((((((((.(((((((.(((.........))).)))))))))))))))))))).)).)).)))

Structure

   a  a  a             u       g   cca 
cug gg gc gggcuuagcugcu gugagca ggu   c
||| || || ||||||||||||| ||||||| |||   a
ggc cc CG CUUGAAUCGGUGA CACUUgu cua   c
   c  C  C             -       a   aac 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature lca-miR-27a

• Accession: MIMAT0002746
• Description: Lemur catta lca-miR-27a mature miRNA
• Sequence: 51 - UUCACAGUGGCUAAGUUCCGCC - 72
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24