Accession
MI0003000
Description
Pan troglodytes
ptr-mir-92-1 precursor miRNA
Sequence
30825
reads,
427.0
reads per million, 24 experiments
cuuucuacacAGGUUGGGAUCGGUUGCAAUGCUguguuucuguauggUAUUGCACUUGUCCCGGCCUGUUgaguuugg
....((..((((((((((((.(((.(((((((((((......)))))))))))))).))))))))))))..)).....
....((..((((((((((((.(((.(((((((((((......)))))))))))))).))))))))))))..)).....
Structure
-cuuu ac C U uu
cu acAGGUUGGGAU GGU GCAAUGCUgug u
|| |||||||||||| ||| |||||||||||
ga UGUCCGGCCCUG UCA CGUUAUgguau c
gguuu gU U - gu
Annotation confidence
High
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.
Genome context
chr13: 77007420-77007497 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from ptr-mir-92-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ptr-miR-92-1-5p
| Accession | MIMAT0052244 |
| Description | Pan troglodytes ptr-miR-92-1-5p mature miRNA |
| Sequence | 11 - AGGUUGGGAUCGGUUGCAAUGCU - 33 |
| Evidence | not_experimental |
Mature ptr-miR-92-3p
| Accession | MIMAT0002699 |
| Description | Pan troglodytes ptr-miR-92-3p mature miRNA |
| Sequence | 48 - UAUUGCACUUGUCCCGGCCUGUU - 70 |
| Evidence | not_experimental |
References
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