Stem-loop ppa-mir-92a-1

Accession

MI0002988

Description

Pan paniscus ppa-mir-92a-1 precursor miRNA

Sequence

cuuucuacacagguugggaucgguugcaaugcuguguuucuguauggUAUUGCACUUGUCCCGGCCUGUugaguuugg
....((..((((((((((((.(((.(((((((((((......)))))))))))))).))))))))))))..)).....

Structure

-cuuu  ac            c   u           uu 
     cu  acagguugggau ggu gcaaugcugug  u
     ||  |||||||||||| ||| |||||||||||   
     ga  UGUCCGGCCCUG UCA CGUUAUgguau  c
gguuu  gu            U   -           gu 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr13: 91708037-91708114 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from ppa-mir-92a-1

Mature ppa-miR-92a

• Accession: MIMAT0002685
• Description: Pan paniscus ppa-miR-92a mature miRNA
• Sequence: 48 - UAUUGCACUUGUCCCGGCCUGU - 69
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24