Accession
MI0002934
Description
Pan troglodytes
ptr-mir-181b-1 precursor miRNA
Sequence
ccugugcagagauuauuuuuuaaaaggucacaaucAACAUUCAUUGCUGUCGGUGGGUugaacuguguggacaagcucacugaacaaugaaugcaacuguggccccgc
.........................(((((((.....(((((((((...((((((((((....(((....))))))))))))).)))))))))....)))))))....
.........................(((((((.....(((((((((...((((((((((....(((....))))))))))))).)))))))))....)))))))....
Structure
ccugugcagagauuauuuuuuaaaa aucAA CUG gaac g
ggucaca CAUUCAUUG UCGGUGGGUu ugu u
||||||| ||||||||| |||||||||| |||
ccggugu guaaguaac agucacucga aca g
---------------------cgcc -caac --a ---- g
Annotation confidence
Low
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.
Genome context
chr1: 177685189-177685296 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ptr-mir-181b-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ptr-miR-181b
| Accession | MIMAT0002625 |
| Description | Pan troglodytes ptr-miR-181b mature miRNA |
| Sequence | 36 - AACAUUCAUUGCUGUCGGUGGGU - 58 |
| Evidence | not_experimental |
References
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