Stem-loop mml-mir-223

Accession

MI0002897

Description

Macaca mulatta mml-mir-223 precursor miRNA

Literature search

2 open access papers mention mml-mir-223
(5 sentences)

Sequence

519 reads, 4 reads per million, 8 experiments

cccggccuccugcagugccacgcuccguguauuugacaagcugaguuggacacuccgugugguagagUGUCAGUUUGUCAAAUACCCCaagugcggcauaugcuuaccag
...........((((((((.((((..(.((((((((((((((......(((((((.........))))))))))))))))))))).)..)))).))))).))).......

Structure

cccggccuccu   -     a    cc u              gaguug       cgu 
           gca gugcc cgcu  g guauuugacaagcu      gacacuc   g
           ||| ||||| ||||  | ||||||||||||||      |||||||   u
           cgu uacgg guga  C CAUAAACUGUUUGA      CUGUgag   g
----gaccauu   a     c    aC C              ------       aug 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chrX: 60234773-60234882 [+]

Mature mml-miR-223

• Accession: MIMAT0002588
• Description: Macaca mulatta mml-miR-223 mature miRNA
• Sequence: 68 - UGUCAGUUUGUCAAAUACCCC - 88
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24