Accession
MI0002864
Description
Pongo pygmaeus
ppy-mir-216a precursor miRNA
Sequence
gauggcugugaguuggcuUAAUCUCAGCUGGCAACUGUGagauguucauacaaucccucacaguggucucugggauuaugcuaaacagagcaauuuccuugcccucacga
......(((((((((((.(((((((((..(((.((((((((.(((....)))....)))))))).))).))))))))).))))).....((((.....)))).)))))).
......(((((((((((.(((((((((..(((.((((((((.(((....)))....)))))))).))).))))))))).))))).....((((.....)))).)))))).
Structure
gauggc ------------------- u CU A ---a u
ugugag uuggc UAAUCUCAG GGC ACUGUGag ugu c
|||||| ||||| ||||||||| ||| |||||||| |||
gcacuc aaucg auuaggguc cug ugacacuc aca a
-----a ccguuccuuuaacgagaca u -u g ccua u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.
Genome context
chr2A: 55022400-55022509 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ppy-mir-216a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppy-miR-216a
| Accession | MIMAT0002561 |
| Description | Pongo pygmaeus ppy-miR-216a mature miRNA |
| Sequence | 19 - UAAUCUCAGCUGGCAACUGUG - 39 |
| Evidence | not_experimental |
References
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