Accession
MI0002862
Description
Pan troglodytes
ptr-mir-216a precursor miRNA
Sequence
gauggcugugaguuggcUUAAUCUCAGCUGGCAACUGUgagauguucauacaaucccucacaguggucucugggauuaugcuaaacagagcaauuuccuagcccucacga
((.(((((.((((((((.(((((((((..(((.((((((((.(((....)))....)))))))).))).))))))))).)))))..........))).))))).))....
((.(((((.((((((((.(((((((((..(((.((((((((.(((....)))....)))))))).))).))))))))).)))))..........))).))))).))....
Structure
---- u u ---------- U CU A ---a u
ga ggcug gag uuggc UAAUCUCAG GGC ACUGUgag ugu c
|| ||||| ||| ||||| ||||||||| ||| |||||||| |||
cu ccgau cuu aaucg auuaggguc cug ugacacuc aca a
agca c c uaacgagaca u -u g ccua u
Annotation confidence
Low
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.
Genome context
chr2A: 57256906-57257015 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ptr-mir-216a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ptr-miR-216a
| Accession | MIMAT0002559 |
| Description | Pan troglodytes ptr-miR-216a mature miRNA |
| Sequence | 18 - UUAAUCUCAGCUGGCAACUGU - 38 |
| Evidence | not_experimental |
References
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