Stem-loop lla-mir-205

Accession

MI0002848

Description

Lagothrix lagotricha lla-mir-205 precursor miRNA

Sequence

aaagauccucgggcaauccaugugcuucucuugUCCUUCAUUCCACCGGAGUCUGucucauacccaaccagauuucaguggagugaaguucaggaggcauggagcugacg
...........(((..(((((((....((((((..(((((((((((.((((((((.............)))))))).)))))))))))..))))))))))))))))....

Structure

aaagauccucg   aa       gcuu      UC           C        ucuca 
           ggc  uccaugu    cucuug  CUUCAUUCCAC GGAGUCUG     u
           |||  |||||||    ||||||  ||||||||||| ||||||||     a
           ucg  agguacg    gaggac  gaagugaggug cuuuagac     c
-------gcag   --       ----      uu           a        caacc 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature lla-miR-205

• Accession: MIMAT0002545
• Description: Lagothrix lagotricha lla-miR-205 mature miRNA
• Sequence: 34 - UCCUUCAUUCCACCGGAGUCUG - 55
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24