miRBase entry: ggo-mir-124a

Stem-loop ggo-mir-124a


Accession
MI0002761
Description
Gorilla gorilla ggo-mir-124a precursor miRNA


Sequence

137818 reads, 13081.0 reads per million, 4 experiments
aucaagauuagaggcucugcucucCGUGUUCACAGCGGACCUUGAuuuaaugucauacaauUAAGGCACGCGGUGAAUGCCAAgagcggagccuacggcugcgcuugaa
.(((((..(((((((((((((((..((((((((.(((..((((((((...........))))))))..))).))))))))..))))))))))))....)))..))))).

Structure
a     au   ----            cC        A   GA        uaau 
 ucaag  uag    aggcucugcucu  GUGUUCAC GCG  CCUUGAuu    g
 |||||  |||    ||||||||||||  |||||||| |||  ||||||||    u
 aguuc  guc    uccgaggcgagA  CGUAAGUG CGC  GGAAUuaa    c
a     gc   ggca            AC        G   AC        caua 


Annotation confidence High
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Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
chr8: 51160798-51160906 [-]

Database links

Mature ggo-miR-124a-5p

Accession MIMAT0061258
Description Gorilla gorilla ggo-miR-124a-5p mature miRNA
Sequence 25 - CGUGUUCACAGCGGACCUUGA - 45
Evidence experimental

Mature ggo-miR-124a-3p

Accession MIMAT0002465
Description Gorilla gorilla ggo-miR-124a-3p mature miRNA
Sequence 62 - UAAGGCACGCGGUGAAUGCCAA - 83
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24