Stem-loop ggo-mir-186

Accession

MI0002606

Description

Gorilla gorilla ggo-mir-186 precursor miRNA

Sequence

596 reads, 37.0 reads per million, 4 experiments

ugcuuguaacuuucCAAAGAAUUCUCCUUUUGGGCUUucugguuuuauuuuaaGCCCAAAGGUGAAUUUUUUGGgaaguuugagcu
.(((((.(((((((((((((((((.(((((.((((((..............))))))))))).)))))))))))))))))))))).

Structure

u     u                 U     U      ucuggu 
 gcuug aacuuucCAAAGAAUUC CCUUU GGGCUU      u
 ||||| ||||||||||||||||| ||||| ||||||       
 cgagu uugaagGGUUUUUUAAG GGAAA CCCGaa      u
u     -                 U     -      uuuuau 

Annotation confidence High

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr1: 71927669-71927754 [-]

Mature ggo-miR-186-5p

• Accession: MIMAT0002305
• Description: Gorilla gorilla ggo-miR-186-5p mature miRNA
• Sequence: 15 - CAAAGAAUUCUCCUUUUGGGCUU - 37
• Evidence: not_experimental

Mature ggo-miR-186-3p

• Accession: MIMAT0061248
• Description: Gorilla gorilla ggo-miR-186-3p mature miRNA
• Sequence: 54 - GCCCAAAGGUGAAUUUUUUGG - 74
• Evidence: experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24