Accession
MI0002551
Description
Pongo pygmaeus
ppy-mir-143 precursor miRNA
Sequence
gcgcagcgcccugucucccagccugaggugcagugcugcaucucuggucaguugggagucUGAGAUGAAGCACUGUAGCUCAggaagagagaaguuguucugcagc
((((((.((....((((.(..((((((.(((((((((.((((((.((((......)).)).)))))).))))))))).))))))..).))))....)).)))).))
((((((.((....((((.(..((((((.(((((((((.((((((.((((......)).)).)))))).))))))))).))))))..).))))....)).)))).))
Structure
- c ccug c ag g g u - ag gc gcag gc ucuc c ccugag ugcagugcu caucuc gg uc u || |||| || |||| | |||||| ||||||||| |||||| || || cg cguc ug agag g ggACUC AUGUCACGA GUAGAG cu ag u a u uuga a aa G A U g gg
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.
Genome context
chr5: 151351266-151351371 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ppy-mir-143
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppy-miR-143
| Accession | MIMAT0002259 |
| Description | Pongo pygmaeus ppy-miR-143 mature miRNA |
| Sequence | 61 - UGAGAUGAAGCACUGUAGCUCA - 82 |
| Evidence | not_experimental |
References
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