Stem-loop ptc-MIR478r

Accession

MI0002386

Description

Populus trichocarpa ptc-MIR478r precursor miRNA

Literature search

1 open access papers mention ptc-MIR478r
(1 sentences)

Sequence

17 reads, 0.0 reads per million, 7 experiments

agucuccuaguuugagggacugauaucauuuuUAACGUGUCUCCUAUUUUUAGGGAcc
.(((.(((((....((((((..................))).)))....)))))))).

Structure

a   u     uuug   -   ugauauca 
 guc ccuag    agg gac        u
 ||| |||||    ||| |||         
 cAG GGAUU    UCC CUG        u
c   -     UUUA   U   UGCAAUuu 

Annotation confidence Not enough data

Genome context

CM000337.2: 44456408-44456465 [+]

Mature ptc-miR478r-3p

• Accession: MIMAT0002092
• Description: Populus trichocarpa ptc-miR478r-3p mature miRNA
• Sequence: 33 - UAACGUGUCUCCUAUUUUUAGGGA - 56
• Evidence: not_experimental

References

1. PubMed ID: 15994906
   Novel and mechanical stress-responsive MicroRNAs in Populus trichocarpa that are absent from Arabidopsis
   "Lu S, Sun YH, Shi R, Clark C, Li L, Chiang VL"
   "Plant Cell (2005) 17:2186-2203