Stem-loop ptc-MIR476b

Accession

MI0002366

Description

Populus trichocarpa ptc-MIR476b precursor miRNA

Gene family

MIPF0000166; MIR476

Literature search

3 open access papers mention ptc-MIR476b
(9 sentences)

Sequence

gcUAGUAAUUCUUCUUUGCAAAAucauuaauuauccuagcucuaauuacuauaauuaauggcuuugcaaagauagauuuacuagcuaaaucuu
((((((((.(((((((((((((.(((((((((((..(((......)))..))))))))))).)))))))))).))).))))))))........

Structure

--------        U   -          A           cc   cu 
        gcUAGUAA UCU UCUUUGCAAA ucauuaauuau  uag  c
        |||||||| ||| |||||||||| |||||||||||  |||   
        cgaucauu aga agaaacguuu gguaauuaaua  auu  u
uucuaaau        u   u          c           uc   aa 

Annotation confidence Not enough data

Genome context

CM000339.2: 16524691-16524783 [-]

Mature ptc-miR476b

• Accession: MIMAT0002072
• Description: Populus trichocarpa ptc-miR476b mature miRNA
• Sequence: 3 - UAGUAAUUCUUCUUUGCAAAA - 23
• Evidence: not_experimental

References

1. PubMed ID: 15994906
   Novel and mechanical stress-responsive MicroRNAs in Populus trichocarpa that are absent from Arabidopsis
   "Lu S, Sun YH, Shi R, Clark C, Li L, Chiang VL"
   "Plant Cell (2005) 17:2186-2203