Stem-loop sbi-MIR395f

Accession

MI0001855

Description

Sorghum bicolor sbi-MIR395f precursor miRNA

Literature search

5 open access papers mention sbi-MIR395f
(35 sentences)

Sequence

16935 reads, 718.0 reads per million, 49 experiments

acaauguuugguguuaccacgAGUUCCCUUCAAGCACUUCAugaggcaccauuaaauaacucuauuuaagauuagguguaauAUGAAGUGUUUGGGGGAACUCuuggugauacucaacaucg
...(((((.((((((((((.(((((((((.((((((((((((...(((((.(((((((....))))))).....)))))...))))))))))))))))))))).)))))))))).)))))..

Structure

aca     u          c         U            gag     ----a       a 
   auguu gguguuacca gAGUUCCCU CAAGCACUUCAu   gcacc     uuaaaua c
   ||||| |||||||||| ||||||||| ||||||||||||   |||||     |||||||  
   uacaa ucauaguggu CUCAAGGGG GUUUGUGAAGUA   ugugg     aauuuau u
-gc     c          u         -            uaa     auuag       c 

Annotation confidence Medium

Genome context

chr6: 57228009-57228130 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from sbi-MIR395f

Mature sbi-miR395f-5p

• Accession: MIMAT0056393
• Description: Sorghum bicolor sbi-miR395f-5p mature miRNA
• Sequence: 22 - AGUUCCCUUCAAGCACUUCA - 41
• Evidence: experimental ; unknown

Mature sbi-miR395f-3p

• Accession: MIMAT0001757
• Description: Sorghum bicolor sbi-miR395f-3p mature miRNA
• Sequence: 83 - AUGAAGUGUUUGGGGGAACUC - 103
• Evidence: not_experimental

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13