Stem-loop sbi-MIR166g

Accession

MI0001853

Description

Sorghum bicolor sbi-MIR166g precursor miRNA

Literature search

5 open access papers mention sbi-MIR166g
(13 sentences)

Sequence

209444 reads, 2528.0 reads per million, 50 experiments

ucaugcucggauuagguuagggGGAUUGUUGUCUGGCUCGGGGUcuccggucgagaauccuuggccuugccggaguugucguugaccggagauuUCGGACCAGGCUUCAAUCCCUUuaaccaugcggcauuuag
..((((.((.((..((((((((((((((..((((((.(((((((((((((((((((...((((((...))).)))...)).))))))))))))))))).))))))..)))))))))))))))).))))))....

Structure

--uc    u  g  ua              UU      C                 -  auc   -   c 
    augc cg au  gguuagggGGAUUG  GUCUGG UCGGGGUcuccggucga ga   cuu ggc  
    |||| || ||  ||||||||||||||  |||||| ||||||||||||||||| ||   ||| ||| u
    uacg gc ua  ccaauUUCCCUAAC  CGGACC GGCUuuagaggccaguu cu   gag ccg  
gauu    -  g  --              UU      A                 g  guu   g   u 

Annotation confidence High

Genome context

chr4: 64857514-64857647 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from sbi-MIR166g

Mature sbi-miR166g-5p

• Accession: MIMAT0056391
• Description: Sorghum bicolor sbi-miR166g-5p mature miRNA
• Sequence: 23 - GGAUUGUUGUCUGGCUCGGGGU - 44
• Evidence: experimental ; unknown

Mature sbi-miR166g-3p

• Accession: MIMAT0001755
• Description: Sorghum bicolor sbi-miR166g-3p mature miRNA
• Sequence: 95 - UCGGACCAGGCUUCAAUCCCUU - 116
• Evidence: not_experimental

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13