Accession
MI0001851
Description
Sorghum bicolor
sbi-MIR159b precursor miRNA
Literature search
3 open access papers mention sbi-MIR159b
(3 sentences)
(3 sentences)
Sequence
32865
reads,
2214.0
reads per million, 50 experiments
ugaaugaagauaugaagaagaagacgacgacgaugaagaaggcgaagaaaagcgaacaaagAGCUCCCUUCGAUCCAAUCCaggaggggaaguggucgguugcagcugccgguucauggaugccucucuggugcagcaaugacugaugcucaccugcacuugcaugggugugcaugacccgggagaugaacccaccaucaucuuucccucgugCUUGGAUUGAAGGGAGCUCCUcucucuuucucucuuucuc
....................................((((((.((.((((((.((.....((((((((((((((((((..((.(((((((((((((.((((.((.((.((((.(((((.((((((....(((((((...((((....).))).))))))).....)))))).))))).)))).)).)))))).))))....))))))))).)).)))))))))))))))))).)).)).)))))).)))))).
....................................((((((.((.((((((.((.....((((((((((((((((((..((.(((((((((((((.((((.((.((.((((.(((((.((((((....(((((((...((((....).))).))))))).....)))))).))))).)))).)).)))))).))))....))))))))).)).)))))))))))))))))).)).)).)))))).)))))).
Structure
ugaaugaagauaugaagaagaagacgacgacgauga c a - c acaaa UC g ---- c g g g u g -cucu caa - u
agaagg ga gaaa ag ga gAGCUCCCUUCGAUCCAA Ca gaggggaag uggu gguu ca cu ccgg ucaug augccu ggugcag uga c g
|||||| || |||| || || |||||||||||||||||| || ||||||||| |||| |||| || || |||| ||||| |||||| ||||||| ||| |
ucuuuc cu cuuu uc cU CUCGAGGGAAGUUAGGUU gu cucccuuuc acca ccaa gu ga ggcc aguac uguggg ucacguc acu g a
-----------------------------------c u - c u ----C -C g uacu c - a g c g uacgu --c c u
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr3: 1229688-1229940 [-]
Database links
Mature sbi-miR159b-5p
| Accession | MIMAT0056389 |
| Description | Sorghum bicolor sbi-miR159b-5p mature miRNA |
| Sequence | 62 - AGCUCCCUUCGAUCCAAUCC - 81 |
| Evidence |
experimental
unknown |
Mature sbi-miR159b-3p
| Accession | MIMAT0001753 |
| Description | Sorghum bicolor sbi-miR159b-3p mature miRNA |
| Sequence | 214 - CUUGGAUUGAAGGGAGCUCCU - 234 |
| Evidence | not_experimental |
References
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