Stem-loop zma-MIR169e

Accession

MI0001834

Description

Zea mays zma-MIR169e precursor miRNA

Literature search

31 open access papers mention zma-MIR169e
(222 sentences)

Sequence

41 reads, 1549.0 reads per million, 12 experiments

gcaauaggggccacucaggcUAGCCAAGGAGACUGCCUACGaaccaacacaaagguccacaauucugauccuuuguaaacaaaggacauaggcaagucauccuuggcuaucagaggcaggcccuuauu
..((((((((((.(((.((.(((((((((((((((((((.(.(((........))).).......((.(((((((....)))))))))))))).)))).)))))))))))).)))...))))))))))

Structure

gc          --a   a  c          -    -     -----------------------------C a   aac 
  aauaggggcc   cuc gg UAGCCAAGGA GACU GCCUA                              G acc   a
  ||||||||||   ||| || |||||||||| |||| |||||                              | |||    
  uuauucccgg   gag cu aucgguuccu cuga cggau                              c ugg   c
--          acg   a  -          a    a     acaggaaacaaauguuuccuagucuuaaca c   aaa 

Annotation confidence Not enough data

Genome context

4: 49933023-49933150 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from zma-MIR169e

Mature zma-miR169e-5p

• Accession: MIMAT0001736
• Description: Zea mays zma-miR169e-5p mature miRNA
• Sequence: 21 - UAGCCAAGGAGACUGCCUACG - 41
• Evidence: not_experimental

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13