Stem-loop mtr-MIR399b

Accession

MI0001743

Description

Medicago truncatula mtr-MIR399b precursor miRNA

Literature search

8 open access papers mention mtr-MIR399b
(24 sentences)

Sequence

1679 reads, 18.0 reads per million, 87 experiments

ucauaGGGCAUGUCUCUAUUGGUAGGugauauggugauauuucauuugaauuagaggcuucagaaauucacuUGCCAAAGGAGAGCUGCCCUGugaguguuuagcuuaaaca
((((((((((..(((((.(((((((((((.....(((..((((..........))))..))).....))))))))))).)))))..)))))))))).((((((...))))))

Structure

----------------          UG     A           uaugg   ua    auuu 
                ucauaGGGCA  UCUCU UUGGUAGGuga     uga  uuuc    g
                ||||||||||  ||||| |||||||||||     |||  ||||     
                aguGUCCCGU  AGAGG AACCGUucacu     acu  ggag    a
acaaauucgauuugug          CG     A           uaaag   uc    auua 

Annotation confidence Medium

Genome context

chr6: 21517100-21517211 [-]

Mature mtr-miR399b-5p

• Accession: MIMAT0054742
• Description: Medicago truncatula mtr-miR399b-5p mature miRNA
• Sequence: 6 - GGGCAUGUCUCUAUUGGUAGG - 26
• Evidence: experimental ; unknown

Mature mtr-miR399b-3p

• Accession: MIMAT0001645
• Description: Medicago truncatula mtr-miR399b-3p mature miRNA
• Sequence: 73 - UGCCAAAGGAGAGCUGCCCUG - 93
• Evidence: not_experimental

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13