Stem-loop hsa-mir-431

Accession

MI0001721

Symbol

HGNC: MIR431

Description

Homo sapiens hsa-mir-431 precursor miRNA

Gene family

MIPF0000142; mir-431

Literature search

28 open access papers mention hsa-mir-431
(46 sentences)

Sequence

2041 reads, 54 reads per million, 93 experiments

uccugcuuguccugcgaggUGUCUUGCAGGCCGUCAUGCAggccacacugacgguaacguugCAGGUCGUCUUGCAGGGCUUCUcgcaagacgacauccucaucaccaacgacg
...((.(((((.(((((((.((((((((((.((.(.((((((((........)))....))))).).)).)))))))))).))))))).)))))))..................

Structure

---------------ucc  c     c       U          C  U A     ----   aca 
                  ug uuguc ugcgagg GUCUUGCAGG CG C UGCAg    gcc   c
                  || ||||| ||||||| |||||||||| || | |||||    |||    
                  ac agcag acgcUCU CGGGACGUUC GC G ACguu    ugg   u
gcagcaaccacuacuccu  -     a       U          U  U G     gcaa   cag 

Annotation confidence Not enough data

Genome context

chr14: 100881007-100881120 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from hsa-mir-431

Mature hsa-miR-431-5p

• Accession: MIMAT0001625
• Description: Homo sapiens hsa-miR-431-5p mature miRNA
• Sequence: 20 - UGUCUUGCAGGCCGUCAUGCA - 40
• Evidence: experimental ; cloned [1-2]

Mature hsa-miR-431-3p

• Accession: MIMAT0004757
• Description: Homo sapiens hsa-miR-431-3p mature miRNA
• Sequence: 63 - CAGGUCGUCUUGCAGGGCUUCU - 84
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 15891114
   Clustering and conservation patterns of human microRNAs
   "Altuvia Y, Landgraf P, Lithwick G, Elefant N, Pfeffer S, Aravin A, Brownstein MJ, Tuschl T, Margalit H"
   "Nucleic Acids Res (2005) 33:2697-2706