miRBase entry: cfa-mir-365-1

Stem-loop cfa-mir-365-1


Accession
MI0001657
Description
Canis familiaris cfa-mir-365-1 precursor miRNA
Gene family
MIPF0000061; mir-365


Sequence

accgcagggaaaaugagggacuuuugggggcagauguguuuccauuccacuaucaUAAUGCCCCUAAAAAUCCUUAUugcucuugca
...((((((..((((((((..(((((((((((((((((.........))).)))....))))))))))).))))))))..)))))).

Structure
acc      aa        ac           ----   -   uuu 
   gcaggg  aaugaggg  uuuugggggca    gau gug   c
   ||||||  ||||||||  |||||||||||    ||| |||   c
   cguucu  uUAUUCCU  AAAAUCCCCGU    cua cac   a
--a      cg        -A           AAUa   u   cuu 


Annotation confidence Not enough data
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Comments
Xie et al. [1] refer to this sequence by the internal identifier MIR245. The sequence is unrelated to C. elegans mir-245 (MIR:MI0000321).

Genome context
chr6: 28873135-28873221 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cfa-mir-365-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-365

Accession MIMAT0001540
Description Canis familiaris cfa-miR-365 mature miRNA
Sequence 56 - UAAUGCCCCUAAAAAUCCUUAU - 77
Evidence experimental
cloned [1]

References

  1. PubMed ID: 15735639
    Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals
    "Xie X, Lu J, Kulbokas EJ, Golub TR, Mootha V, Lindblad-Toh K, Lander ES, Kellis M"
    "Nature (2005) 434:338-345