Stem-loop cfa-mir-365-2

Accession

MI0001647

Description

Canis familiaris cfa-mir-365-2 precursor miRNA

Gene family

MIPF0000061; mir-365

Sequence

agaguguucaaggacagcaagaaaaaugagggacuuucaggggcagcuguguuuucugacucagucaUAAUGCCCCUAAAAAUCCUUAUuguucuugcagugugcaucggg
...........(.((((((((((.((((((((..(((.(((((((((((.(((....))).)))).....))))))).))).)))))))).)))))))..))).)......

Structure

agaguguucaa g   --       a        ac   c       -----    u   u 
           g aca  gcaagaa aaugaggg  uuu aggggca     gcug guu u
           | |||  ||||||| ||||||||  ||| |||||||     |||| |||  
           c ugu  cguucuu uUAUUCCU  AAA UCCCCGU     ugac cag c
-----gggcua g   ga       g        -A   A       AAUac    u   u 

Annotation confidence Not enough data

Comments

Xie et al. [1] refer to this sequence by the internal identifier MIR190. The sequence is unrelated to mammalian mir-190 (MIR:MI0000486).

Genome context

chr9: 41303092-41303202 [-]

Mature cfa-miR-365

• Accession: MIMAT0001540
• Description: Canis familiaris cfa-miR-365 mature miRNA
• Sequence: 68 - UAAUGCCCCUAAAAAUCCUUAU - 89
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15735639
   Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals
   "Xie X, Lu J, Kulbokas EJ, Golub TR, Mootha V, Lindblad-Toh K, Lander ES, Kellis M"
   "Nature (2005) 434:338-345