Stem-loop aga-mir-277

Accession

MI0001615

Description

Anopheles gambiae aga-mir-277 precursor miRNA

Literature search

5 open access papers mention aga-mir-277
(11 sentences)

Sequence

306477 reads, 27921.0 reads per million, 24 experiments

guuuugggguaCGUGUCAGAGGUGCAUUUACAucgaacuauuccaguugagguauuugUAAAUGCACUAUCUGGUACGACAuuccagaau
((((((((((.(((((((((((((((((((((((.((((.....))))))......)))))))))))).)))))))))..))))))))))

Structure

          -a         -            ------  g    a 
guuuuggggu  CGUGUCAGA GGUGCAUUUACA      uc aacu u
||||||||||  ||||||||| ||||||||||||      || |||| u
uaagaccuuA  GCAUGGUCU UCACGUAAAUgu      ag uuga c
          CA         A            uuaugg  -    c 

Annotation confidence High

Genome context

ref|NC_064601.1|: 28080077-28080166 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from aga-mir-277

Mature aga-miR-277-5p

• Accession: MIMAT0053004
• Description: Anopheles gambiae aga-miR-277-5p mature miRNA
• Sequence: 12 - CGUGUCAGAGGUGCAUUUACA - 32
• Evidence: not_experimental

Mature aga-miR-277-3p

• Accession: MIMAT0001510
• Description: Anopheles gambiae aga-miR-277-3p mature miRNA
• Sequence: 59 - UAAAUGCACUAUCUGGUACGACA - 81
• Evidence: not_experimental

References