Stem-loop sbi-MIR167g

Accession

MI0001553

Description

Sorghum bicolor sbi-MIR167g precursor miRNA

Literature search

3 open access papers mention sbi-MIR167g
(7 sentences)

Sequence

5040312 reads, 56311.0 reads per million, 50 experiments

auuugugcaccuuaagcagcUGAAGCUGCCAGCAUGAUCUGaucuuaauuucuuuuacuggcaaacuucggaugccuaagaucaGAUCGUGCUGCGCAGUUUCACCUGcuaauuggagcacag
...(((((.((...(((((.(((((((((((((((((((((((((((............((((..(...)..)))))))))))))))))))))).))))))))).)))))....)).))))).

Structure

auu     a  -uua     c         -                  auuucuuuuacu    aa u 
   ugugc cc    agcag UGAAGCUGC CAGCAUGAUCUGaucuua            ggca  c  
   ||||| ||    ||||| ||||||||| ||||||||||||||||||            ||||  | u
   acacg gg    ucGUC ACUUUGACG GUCGUGCUAGacuagaau            ccgu  g  
--g     a  uuaa     C         C                  ------------    ag c 

Annotation confidence High

Genome context

chr3: 64085700-64085822 [-]

Mature sbi-miR167g-5p

• Accession: MIMAT0001449
• Description: Sorghum bicolor sbi-miR167g-5p mature miRNA
• Sequence: 21 - UGAAGCUGCCAGCAUGAUCUG - 41
• Evidence: not_experimental

Mature sbi-miR167g-3p

• Accession: MIMAT0056371
• Description: Sorghum bicolor sbi-miR167g-3p mature miRNA
• Sequence: 85 - GAUCGUGCUGCGCAGUUUCACCUG - 108
• Evidence: experimental ; unknown

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13