Stem-loop sbi-MIR164b

Accession

MI0001549

Description

Sorghum bicolor sbi-MIR164b precursor miRNA

Literature search

5 open access papers mention sbi-MIR164b
(13 sentences)

Sequence

350182 reads, 6876.0 reads per million, 50 experiments

gaggggcgagcaaaccgugcUGGAGAAGCAGGGCACGUGCUcgucgucgcugcaugcguggucgucgucgcagCACGUGCGCUCCUUCUCCAACauggcuucucgccccca
(.((((((((.((.(((((.((((((((.((.(((((((((((.((.((((((....)))).)).)).)).))))))))).)).)))))))).))))).))))))))))).

Structure

- a        c  a     c        C  G         -  u  u  -    a 
 g ggggcgag aa ccgug UGGAGAAG AG GCACGUGCU cg cg cg cugc u
 | |||||||| || ||||| |||||||| || ||||||||| || || || ||||  
 c ccccgcuc uu gguaC ACCUCUUC UC CGUGCACga gc gc gc ggug g
a -        -  c     A        C  G         c  u  u  u    c 

Annotation confidence High

Genome context

chr4: 65513692-65513802 [-]

Mature sbi-miR164b-5p

• Accession: MIMAT0001445
• Description: Sorghum bicolor sbi-miR164b-5p mature miRNA
• Sequence: 21 - UGGAGAAGCAGGGCACGUGCU - 41
• Evidence: not_experimental

Mature sbi-miR164b-3p

• Accession: MIMAT0056368
• Description: Sorghum bicolor sbi-miR164b-3p mature miRNA
• Sequence: 74 - CACGUGCGCUCCUUCUCCAAC - 94
• Evidence: experimental ; unknown

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13