Stem-loop sbi-MIR395e

Accession

MI0001537

Description

Sorghum bicolor sbi-MIR395e precursor miRNA

Literature search

4 open access papers mention sbi-MIR395e
(31 sentences)

Sequence

17203 reads, 714.0 reads per million, 49 experiments

auuagguuugguguccccgggaGUUCUCUGCAAGCACUUCACGaggcacuauuuugagagcuuuuGUGAAGUGUUUGGGGGAACUCuugaugccacuaaccauuu
....(((((((((((...(((((((((((.(((((((((((((((((.((......)).)).)))))))))))))))))))))))))))))))))..))))....

Structure

auua    --       ccc           G               -  a  au 
    gguu  ugguguc   gggaGUUCUCU CAAGCACUUCACGag gc cu  u
    ||||  |||||||   ||||||||||| ||||||||||||||| || ||   
    ccaa  accguag   uuCUCAAGGGG GUUUGUGAAGUGuuu cg ga  u
uuua    uc       ---           -               u  a  gu 

Annotation confidence High

Genome context

chr6: 57228710-57228814 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from sbi-MIR395e

Mature sbi-miR395e-5p

• Accession: MIMAT0056356
• Description: Sorghum bicolor sbi-miR395e-5p mature miRNA
• Sequence: 23 - GUUCUCUGCAAGCACUUCACG - 43
• Evidence: experimental ; unknown

Mature sbi-miR395e-3p

• Accession: MIMAT0001433
• Description: Sorghum bicolor sbi-miR395e-3p mature miRNA
• Sequence: 66 - GUGAAGUGUUUGGGGGAACUC - 86
• Evidence: not_experimental

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13