Stem-loop sbi-MIR395b

Accession

MI0001533

Description

Sorghum bicolor sbi-MIR395b precursor miRNA

Literature search

6 open access papers mention sbi-MIR395b
(33 sentences)

Sequence

16741 reads, 688.0 reads per million, 49 experiments

guuagguuuggugucccuaggaGUUCUCUGCAAGCACUUCACGaggcaucguuuugagagcuuuuGUGAAGUGUUUGGGGGAACUCuuagugucacaaaucauuu
....((((((.((.(.(((((((((((((.(((((((((((((((((.((.......)))).)))))))))))))))))))))))))))).).))))))))....

Structure

guua      g  u c             G               -  a  gu 
    gguuug ug c cuaggaGUUCUCU CAAGCACUUCACGag gc uc  u
    |||||| || | ||||||||||||| ||||||||||||||| || ||  u
    cuaaac ac g gauuCUCAAGGGG GUUUGUGAAGUGuuu cg ag  u
uuua      -  u u             -               u  -  ag 

Annotation confidence High

Genome context

chr6: 57784145-57784249 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from sbi-MIR395b

Mature sbi-miR395b-5p

• Accession: MIMAT0056353
• Description: Sorghum bicolor sbi-miR395b-5p mature miRNA
• Sequence: 23 - GUUCUCUGCAAGCACUUCACG - 43
• Evidence: experimental ; unknown

Mature sbi-miR395b-3p

• Accession: MIMAT0001429
• Description: Sorghum bicolor sbi-miR395b-3p mature miRNA
• Sequence: 66 - GUGAAGUGUUUGGGGGAACUC - 86
• Evidence: not_experimental

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13