Stem-loop cbr-mir-70

Accession

MI0001402

Description

Caenorhabditis briggsae cbr-mir-70 precursor miRNA

Sequence

aaaacggauguaucucuaggaacagccaucauguaagacauuucuaacugaaagaugUAAUACGUGAUUGGUGUUCCCAGaguuuaccguuuccuucuuuuauuuuuccaaa
.((((((......((((.((((((.(.((((((((..(((((((.....))..)))))..)))))))).).)))))).))))....))))))....................

Structure

-------------------a      auguau    a      g c        ag     --  u 
                    aaacgg      cucu ggaaca c aucaugua  acauu  uc a
                    ||||||      |||| |||||| | ||||||||  |||||  || a
                    uuugcc      gaGA CCUUGU G UAGUGCAU  Uguag  ag c
aaaccuuuuuauuuucuucc      --auuu    C      G U        AA     aa  u 

Annotation confidence Not enough data

Comments

This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae. The mature sequence differs from the elegans sequence at 4 positions.

Genome context

chrV: 12360146-12360257 [-]

Mature cbr-miR-70

• Accession: MIMAT0001300
• Description: Caenorhabditis briggsae cbr-miR-70 mature miRNA
• Sequence: 58 - UAAUACGUGAUUGGUGUUCCCAG - 80
• Evidence: not_experimental

References

1. PubMed ID: 12672692
   The microRNAs of Caenorhabditis elegans
   "Lim LP, Lau NC, Weinstein EG, Abdelhakim A, Yekta S, Rhoades MW, Burge CB, Bartel DP"
   "Genes Dev (2003) 17:991-1008