Stem-loop gga-mir-223

Accession

MI0001208

Description

Gallus gallus gga-mir-223 precursor miRNA mir-223

Gene
family

RF00664; mir-223

Literature search

17 open access papers mention gga-mir-223
(138 sentences)

Sequence

1328 reads, 18 reads per million, 5 experiments

cugcagugcagcacugcguguauuugacaagcugaguuugacacucagucuggcagagUGUCAGUUUGUCAAAUACCCCaagugaggcacuugcugagca
..(((((((..((((....((((((((((((((......(((((((.((...)).)))))))))))))))))))))....))))..)))).)))......

Structure

----cu   -    ag    gcgu              gaguuu       a  c 
      gca gugc  cacu    guauuugacaagcu      gacacuc gu  
      ||| ||||  ||||    ||||||||||||||      ||||||| || u
      cgu cacg  guga    CAUAAACUGUUUGA      CUGUgag cg  
acgagu   u    ga    aCCC              ------       a  g 

Annotation confidence Not enough data

Genome context

chr4: 249565-249664 [+]

Mature gga-miR-223

• Accession: MIMAT0001140
• Description: Gallus gallus gga-miR-223 mature miRNA
• Sequence: 59 - UGUCAGUUUGUCAAAUACCCC - 79
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716


2. 
   "McBride D, Carre W, Law A, Clinton M"
   (None) None: