Stem-loop gga-mir-128-2

Accession

MI0001192

Description

Gallus gallus gga-mir-128-2 precursor miRNA mir-128

Gene
family

RF00649; mir-128

Literature search

8 open access papers mention gga-mir-128-2
(40 sentences)

Sequence

101295 reads, 1115 reads per million, 5 experiments

uguccagcuggaagGGGGGCCGUUACACUGUAAGAGAgugaguagcaggucUCACAGUGAACCGGUCUCUUUuccugcuguguc
....((((.(((((((((((((...((((((..((((.(........).))))))))))...))))))))))))).))))....

Structure

uguc    u             UUA      AA    g gag 
    cagc ggaagGGGGGCCG   CACUGU  GAGA u   u
    |||| |||||||||||||   ||||||  |||| |    
    gucg ccuUUUCUCUGGC   GUGACA  CUcu g   a
cugu    u             CAA      --    g acg 

Annotation confidence High

Genome context

chr2: 45670113-45670196 [+]

Mature gga-miR-128-3p

• Accession: MIMAT0001123
• Description: Gallus gallus gga-miR-128-3p mature miRNA
• Sequence: 52 - UCACAGUGAACCGGUCUCUUU - 72
• Evidence: experimental ; cloned [2], Northern [2], Illumina [3]

Mature gga-miR-128-2-5p

• Accession: MIMAT0026506
• Description: Gallus gallus gga-miR-128-2-5p mature miRNA
• Sequence: 15 - GGGGGCCGUUACACUGUAAGAGA - 37
• Evidence: experimental ; Illumina [3]

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716


2. 
   "McBride D, Carre W, Law A, Clinton M"
   (None) None:


3. PubMed ID: 16750530
   Identification of microRNAs from different tissues of chicken embryo and adult chicken
   "Xu H, Wang X, Du Z, Li N"
   "FEBS Lett (2006) 580:3610-3616


4. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45