Accession
MI0001078
Description
Arabidopsis thaliana
ath-MIR406 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.
Literature search
1 open access papers mention ath-MIR406
(1 sentences)
(1 sentences)
Sequence
3197
reads,
24.0
reads per million, 168 experiments
uaaagucuuaauuuuuaguuaucacgauuuagcacauaucaaucuauagauuugauuuuucuuuuauuaguucuuAAAUUUUGAUUUGAGACAGUAACUauucaaaUAGAAUGCUAUUGUAAUCCAGaauccgaaagaaacgaaucaaaaaaaaaaaaaacgagucuucauaguaaaaaucgauuaacuaaaaaggaugg
....((((...((((((((((...((((((.............(((((((((((.(((((.((((.((.((((.....(((((((((((.((((((..(((((.....))))).))))))..))..)))).))))).....)))).)).)))).))))).)))))))..))))...))))))..))))))))))))))..
....((((...((((((((((...((((((.............(((((((((((.(((((.((((.((.((((.....(((((((((((.((((((..(((((.....))))).))))))..))..)))).))))).....)))).)).)))).))))).)))))))..))))...))))))..))))))))))))))..
Structure
uaaa uaa uca agcacauaucaau -- a c a a uuAAA - -- -G AC a
gucu uuuuuaguua cgauuu cuau agauuug uuuuu uuuu uu guuc UUUUG AUUU GA ACAGUA Uauuc a
|||| |||||||||| |||||| |||| ||||||| ||||| |||| || |||| ||||| |||| || |||||| ||||| a
uagg aaaaaucaau gcuaaa gaua ucugagc aaaaa aaaa aa uaag aaagc uaaG CU UGUUAU GUAAG U
--gg --- -ua ----------aau cu a a a c caaag c AC AA -C A
