Stem-loop rno-mir-326

Accession

MI0000599

Description

Rattus norvegicus rno-mir-326 precursor miRNA

Literature search

14 open access papers mention rno-mir-326
(104 sentences)

Sequence

53172 reads, 47 reads per million, 484 experiments

cucaucugucuguggggcuGGGGGCAGGGCCUUUGUGAAggcggguuaugcucagaucgCCUCUGGGCCCUUCCUCCAGUcccgaggcagauuua
...((((((((.((((((((((((.(((((((......((((((............))))))..))))))).))))))))))))))))))))...

Structure

cuc        g            C       UUGUGA      guuau 
   aucugucu uggggcuGGGGG AGGGCCU      Aggcgg     g
   |||||||| |||||||||||| |||||||      ||||||      
   uagacgga gcccUGACCUCC UCCCGGG      UCCgcu     c
auu        -            U       ----UC      agacu 

Annotation confidence Not enough data

Genome context

chr1: 164518401-164518495 [+]

Mature rno-miR-326-5p

• Accession: MIMAT0017028
• Description: Rattus norvegicus rno-miR-326-5p mature miRNA
• Sequence: 20 - GGGGGCAGGGCCUUUGUGAA - 39
• Evidence: experimental ; SOLiD [3]

Mature rno-miR-326-3p

• Accession: MIMAT0000560
• Description: Rattus norvegicus rno-miR-326-3p mature miRNA
• Sequence: 60 - CCUCUGGGCCCUUCCUCCAGU - 80
• Evidence: experimental ; cloned [1-2], Northern [1], SOLiD [3]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 14691248
   Identification of many microRNAs that copurify with polyribosomes in mammalian neurons
   "Kim J, Krichevsky A, Grad Y, Hayes GD, Kosik KS, Church GM, Ruvkun G"
   "Proc Natl Acad Sci U S A (2004) 101:360-365


3. PubMed ID: 20403161
   Small RNA expression and strain specificity in the rat
   Linsen SE, de Wit E, de Bruijn E, Cuppen E
   BMC Genomics (2010) 11:249