miRBase entry: cbr-mir-250

Stem-loop cbr-mir-250


Accession
MI0000537
Description
Caenorhabditis briggsae cbr-mir-250 precursor miRNA


Sequence

ucuucggaccacgccuucaguugccucgugauccgccgaaucuguaauggacgaaUCACAGUCAACUGUUGGCACGGuccuugaagu
.(((((((((..(((..((((((.((.(((((.((((...........)).)).))))))).))))))..)))..)))))..)))).

Structure
u    --     ac   uu      c  c     c  -  gaau 
 cuuc  ggacc  gcc  caguug cu gugau cg cc    c
 ||||  |||||  |||  |||||| || ||||| || ||    u
 gaag  ccuGG  CGG  GUCAAC GA CACUa gc gg    g
u    uu     CA   UU      U  -     a  a  uaau 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1]. The expression of this miRNA has not been verified in C. briggsae.

Genome context
chrV: 9339442-9339528 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cbr-mir-250
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cbr-miR-250

Accession MIMAT0000505
Description Caenorhabditis briggsae cbr-miR-250 mature miRNA
Sequence 56 - UCACAGUCAACUGUUGGCACGG - 77
Evidence not_experimental

References