Stem-loop cbr-mir-245

Accession

MI0000535

Description

Caenorhabditis briggsae cbr-mir-245 precursor miRNA

Sequence

ucaaugucgaagagcugcuugcaagguaccuaauuguuugacucuauucucaAUUGGUCCCCUCCAAGUAGCUCuauugcauugu
.(((((.((((((((((((((...((.(((.(((((...((......)).)))))))).))...))))))))))).)))))))).

Structure

u     u   -           caa  u   u     uuu  cu 
 caaug cga agagcugcuug   gg acc aauug   ga  c
 ||||| ||| |||||||||||   || ||| |||||   ||   
 guuac guu uCUCGAUGAAC   CC UGG UUAac   cu  u
u     -   a           CUC  C   -     --u  ua 

Annotation confidence Not enough data

Comments

This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1]. The expression of this miRNA has not been verified in C. briggsae.

Genome context

chrI: 6211302-6211386 [-]

Mature cbr-miR-245

• Accession: MIMAT0000503
• Description: Caenorhabditis briggsae cbr-miR-245 mature miRNA
• Sequence: 53 - AUUGGUCCCCUCCAAGUAGCUC - 74
• Evidence: not_experimental

References