miRBase entry: cbr-mir-233

Stem-loop cbr-mir-233


Accession
MI0000530
Description
Caenorhabditis briggsae cbr-mir-233 precursor miRNA

Literature search
1 open access papers mention cbr-mir-233
(1 sentences)

Sequence

aagcauuuuucugucccgcgcaucccuuuguuccaauauucaaaccaguagaaagauuaUUGAGCAAUGCGCAUGUGCGGGAcagauugaauagcug
.(((((((.((((((((((((((.((.((((((.((((.((.............)).)))))))))).).).))))))))))))))..)))).))).

Structure
a   -    -u              c - u      c    u  aaacc 
 agc auuu  ucugucccgcgcau c c uuguuc aaua uc     a
 ||| ||||  |||||||||||||| | | |||||| |||| ||     g
 ucg uaag  agacAGGGCGUGUA G G AACGAG UUau ag     u
g   a    uu              C C U      -    u  aaaga 


Annotation confidence Not enough data
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Comments
This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1]. The expression of this miRNA has not been verified in C. briggsae.

Genome context
chrX: 1737027-1737123 [+]

Database links

Mature cbr-miR-233

Accession MIMAT0000498
Description Caenorhabditis briggsae cbr-miR-233 mature miRNA
Sequence 60 - UUGAGCAAUGCGCAUGUGCGGGA - 82
Evidence not_experimental

References