miRBase entry: cbr-mir-75

Stem-loop cbr-mir-75


Accession
MI0000514
Description
Caenorhabditis briggsae cbr-mir-75 precursor miRNA

Literature search
1 open access papers mention cbr-mir-75
(1 sentences)

Sequence

ugcgagaccgaauugcagucgguugcaagcuucaauacagacaaugguucuugauaUUAAAGCUACCAACCGCCUUCAaaucgugcaucgcg
.((((..((((.(((.((.((((((..(((((.(((((((((....)))..)).)))).)))))..)))))).)).))).))).)..)))).

Structure
u    ga -   a   c  u      ca     c    -  --   a 
 gcga  c cga uug ag cgguug  agcuu aaua ca  gac a
 ||||  | ||| ||| || ||||||  ||||| |||| ||  |||  
 cgcu  g gcu aAC UC GCCAAC  UCGAA UUau gu  uug u
g    ac u   a   U  C      CA     A    a  uc   g 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1]. The expression of this miRNA has not been verified in C. briggsae.

Genome context
chrX: 4419739-4419830 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from cbr-mir-75
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cbr-miR-75

Accession MIMAT0000484
Description Caenorhabditis briggsae cbr-miR-75 mature miRNA
Sequence 57 - UUAAAGCUACCAACCGCCUUCA - 78
Evidence not_experimental

References

  1. PubMed ID: 11679671
    An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans
    "Lau NC, Lim LP, Weinstein EG, Bartel DP"
    "Science (2001) 294:858-862