Stem-loop mmu-mir-302a

Accession

MI0000402

Symbol

MGI: Mir302a

Description

Mus musculus mmu-mir-302a precursor miRNA mir-302

Gene
family

RF00668; mir-302

Literature search

85 open access papers mention mmu-mir-302a
(535 sentences)

Sequence

1892 reads, 72 reads per million, 19 experiments

ccaccACUUAAACGUGGUUGUACUUGCuuuagaccuaagaaagUAAGUGCUUCCAUGUUUUGGUGAugg
(((.((((.((((((((..(((((((((((.........)))))))))))..)))))))).)))).)))

Structure

   c    U        UU           aga 
cca cACU AAACGUGG  GUACUUGCuuu   c
||| |||| ||||||||  |||||||||||   c
ggu GUGG UUUGUACC  CGUGAAUgaaa   u
   A    U        UU           gaa 

Annotation confidence Medium

Genome context

chr3: 127545496-127545564 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from mmu-mir-302a

Mature mmu-miR-302a-5p

• Accession: MIMAT0004579
• Description: Mus musculus mmu-miR-302a-5p mature miRNA
• Sequence: 6 - ACUUAAACGUGGUUGUACUUGC - 27
• Evidence: experimental ; cloned [2], Illumina [3-4]

Mature mmu-miR-302a-3p

• Accession: MIMAT0000380
• Description: Mus musculus mmu-miR-302a-3p mature miRNA
• Sequence: 44 - UAAGUGCUUCCAUGUUUUGGUGA - 66
• Evidence: experimental ; cloned [1-2], Northern [1], Illumina [3-4]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 12919684
   Embryonic stem cell-specific MicroRNAs
   "Houbaviy HB, Murray MF, Sharp PA"
   "Dev Cell (2003) 5:351-358


3. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


4. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009